Comparing two trees by DISC

This example shows how to compare/measure two inferred genotype data (trees).

import scphylo as scp

# sphinx_gallery_thumbnail_path = "_static/thumbnails/disc.png"

First, we load two binary test single-cell genotype data.

grnd = scp.io.read(
    scp.ul.get_file("scphylo.datasets/test/fp_0-fn_0-na_0.ground.CFMatrix")
)
sol = scp.io.read(
    scp.ul.get_file("scphylo.datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix")
)

Calculating the distinctly inherited sets score (DISC).

scp.tl.disc(grnd, sol)

0.7762181197136014

Estimated memory usage: 17 MB