scphylo.datasets.erbc

scphylo.datasets.erbc()

Oestrogen-receptor-positive (ER+) Breast Cancer.

This dataset was introduced in [Wang_2014] and was used in:

• [SCITE] Figure S8 and S9.

• [infSCITE] Figure S15.

• [gpps] Figure 1.

The size is n_cells × n_muts = 47 × 40

Returns

An anndata in which .X is the input noisy.

• .uns[‘params_scite’] is parameters inferred by SCITE.

Return type

anndata.AnnData

Examples

>>> adata = scp.datasets.erbc()
>>> df_in = adata.to_df()