scphylo.pp.filter_mut_mutant_must_present_in_at_least#
- scphylo.pp.filter_mut_mutant_must_present_in_at_least(adata, min_cells=2)[source]#
Remove mutations based on the mutant status.
This function removes mutations that don’t have the status of mutant in at least min_cells cells.
- Parameters
adata¶ (
anndata.AnnData) – The input readcount data.min_cells¶ (
int, optional) – Minimum number of cells, by default 1
