scphylo.datasets.renal_cell_carcinoma

scphylo.datasets.renal_cell_carcinoma()

Clear-cell Renal-cell Carcinoma.

This dataset was introduced in [Xu_2012] and was used in:

• [SCITE] Figure S6 and S7.

• [infSCITE] Figure S14.

The size is n_cells × n_muts = 17 × 35

Returns

An anndata in which .X is the input noisy.

• .uns[‘params_scite’] is parameters inferred by SCITE.

Return type

anndata.AnnData

Examples

>>> adata = scp.datasets.renal_cell_carcinoma()
>>> df_in = adata.to_df()